CRAN Package Check Results for Package MIPHENO

Last updated on 2021-09-22 02:49:29 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2 9.56 84.93 94.49 NOTE
r-devel-linux-x86_64-debian-gcc 1.2 7.56 62.87 70.43 NOTE
r-devel-linux-x86_64-fedora-clang 1.2 119.52 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2 107.61 NOTE
r-devel-windows-x86_64 1.2 10.00 77.00 87.00 NOTE
r-devel-windows-x86_64-gcc10-UCRT 1.2 ERROR
r-patched-linux-x86_64 1.2 9.12 77.97 87.09 NOTE
r-patched-solaris-x86 1.2 155.70 NOTE
r-release-linux-x86_64 1.2 8.89 78.32 87.21 NOTE
r-release-macos-arm64 1.2 NOTE
r-release-macos-x86_64 1.2 NOTE
r-release-windows-ix86+x86_64 1.2 23.00 101.00 124.00 NOTE
r-oldrel-macos-x86_64 1.2 NOTE
r-oldrel-windows-ix86+x86_64 1.2 23.00 77.00 100.00 NOTE

Check Details

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cdf.pval: no visible global function definition for 'median'
    cdf.pval: no visible binding for global variable 'ecdf'
    find_hits: no visible global function definition for 'na.omit'
    mad.scores: no visible global function definition for 'as.formula'
    mad.scores: no visible binding for global variable 'median'
    mad.scores: no visible binding for global variable 'mad'
    rm.outliers: no visible global function definition for 'as.formula'
    rm.outliers: no visible binding for global variable 'median'
    rm.outliers: no visible binding for global variable 'mad'
    Undefined global functions or variables:
     as.formula ecdf mad median na.omit
    Consider adding
     importFrom("stats", "as.formula", "ecdf", "mad", "median", "na.omit")
    to your NAMESPACE file.
    
    Found the following calls to attach():
    File 'MIPHENO/R/cdf.pval.R':
     attach(sample.cdf)
    See section 'Good practice' in '?attach'.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.2
Check: R code for possible problems
Result: NOTE
    cdf.pval: no visible global function definition for ‘median’
    cdf.pval: no visible binding for global variable ‘ecdf’
    find_hits: no visible global function definition for ‘na.omit’
    mad.scores: no visible global function definition for ‘as.formula’
    mad.scores: no visible binding for global variable ‘median’
    mad.scores: no visible binding for global variable ‘mad’
    rm.outliers: no visible global function definition for ‘as.formula’
    rm.outliers: no visible binding for global variable ‘median’
    rm.outliers: no visible binding for global variable ‘mad’
    Undefined global functions or variables:
     as.formula ecdf mad median na.omit
    Consider adding
     importFrom("stats", "as.formula", "ecdf", "mad", "median", "na.omit")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-devel-windows-x86_64-gcc10-UCRT, r-patched-solaris-x86, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.2
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     WARNING: installation-time patches will not be applied, could not get the patches index
Flavor: r-devel-windows-x86_64-gcc10-UCRT

Version: 1.2
Check: PDF version of manual
Result: WARN
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
Flavor: r-devel-windows-x86_64-gcc10-UCRT

Version: 1.2
Check: PDF version of manual without hyperrefs or index
Result: ERROR
    Re-running with no redirection of stdout/stderr.
Flavor: r-devel-windows-x86_64-gcc10-UCRT